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Motif SpanThe number of zinc fingers included in each predicted motif. ZifRC will run a sliding window of zinc fingers along each zinc finger array, and for each sliding window predicts one motif. If zero (default), each motif will include the entire length of one zinc finger array (a zinc finger array is a set of zinc fingers that are separated by linkers of 4-6 amino acids)
Maximum Base SelectivityThe fold-difference between the likelihoods of the most and least preferred bases at the position with maximum base selectivity. For example, a maximum base selectivity of 50 means that at the position with the maximum information content, the most preferred base is 50 times more likely to occur than the least preferred base.